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Genomes
Filters Pass
Allele Count1
Allele Number31388 *
Allele Frequency0.00003186
Grpmax Filtering AF
(95% confidence)
Number of homozygotes0
Mean depth of coverage30.6

Warning This variant is covered in fewer than 50% of individuals in gnomAD v3.1.2 genomes. This may indicate a low-quality site.

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Genetic Ancestry Group Frequencies

712874000.00005437
13526000.00002836
02509400.000
01995000.000
02489800.000
03054600.000
01035200.000
0718000.000
000-
000-
XX312905000.00002325
XY515297000.00003269
Total828202000.00002837
Include:

Related Variants

Liftover

This variant lifts over to the following GRCh38 variant:

Variant Effect Predictor

This variant falls on 3 transcripts in 1 gene.

Note The gene symbols shown below are provided by VEP and may differ from the symbol shown on gene pages.

  1. missense

    1. RBBP9

      1. ENST00000337227.4
        Ensembl canonical transcript for RBBP9
        HGVSp
        p.Lys122Arg
        Domains
        Polyphen
        benign
        SIFT
        tolerated
  2. non coding transcript exon

    1. RBBP9

      1. ENST00000491835.1
        HGVSc
        n.329A>G
      2. ENST00000493184.1
        HGVSc
        n.249A>G

Genomic Constraint of Surrounding 1kb Region

Genomic constraint values displayed are for the region: 20-18470000-18471000

Read more about this constraint.

ExpectedObservedConstraint
179.7164Z = 1.17
o/e = 0.91
Z Score not constrainedconstrained2.184.0

View the genomic constraint values for the 40kb region surrounding this variant: 20-18450604-18490604

ClinVar

ClinVar Variation ID
3152091
Conditions
not specified
Germline classification
Uncertain significance
Review status
criteria provided, single submitter (1 star)
Last evaluated
January 31, 2024

or find more information on the ClinVar website. Data displayed here is from ClinVar's February 1, 2025 release.

Age Distribution

  • Exome
  • Genome
  • Variant carriers
  • All individuals
< 3030-3535-4040-4545-5050-5555-6060-6565-7070-7575-80> 80Age01Variant carriers05001.00K1.50K2.00K2.50K3.00K3.50K4.00K4.50KAll individuals

Genotype Quality Metrics

  • Exome
  • Genome
  • Variant carriers
  • All individuals
0-510-1520-2530-3540-4550-5560-6570-7580-8590-95> 100Genotype quality012345678Variant carriers010.0K20.0K30.0K40.0K50.0K60.0K70.0KAll individuals

Site Quality Metrics

  • Exome
  • Genome
1e11e1.51e21e2.51e31e3.51e41e4.51e51e5.51e61e6.51e71e7.51e81e8.51e91e9.51e10SiteQuality010.0M20.0M30.0M40.0M50.0M60.0M70.0M80.0M90.0MGenome variants6.224e+2

Value: No value for this metric (exome samples), 6.224e+2 (genome samples)

Site quality approximation for all singleton variants.

Read Data


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